Bioprovider implementation issues: a non-intrusive tool for process scheduling and biological data access
DOI:
https://doi.org/10.3395/reciis.v1i2.922Keywords:
Process scheduling, biological data access, BioProviderAbstract
This work discusses the implementation of BioProvider, a tool that efficiently provides data for biological applications. It uses ad-hoc buffer management policies and specific process scheduling control to deal with very large sequence data. We explain how to consider a non-intrusive approach in order to encourage the use of BioProvider in a transparent way while keeping the original applications unchanged. The first instantiation of BioProvider is tailored to BLAST, the most popular sequence comparison program.Downloads
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Published
2007-12-31
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Section
Original articles
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How to Cite
Bioprovider implementation issues: a non-intrusive tool for process scheduling and biological data access. (2007). RECIIS, 1(2). https://doi.org/10.3395/reciis.v1i2.922
